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PhenoTips 1.4 Release Candidate 1 Released

Jul 12 2018

This blog post is not published yet.

The PhenoTips development team is happy to announce the availability of the PhenoTips 1.4 RC1 release.
In this is release, the following items have been done:

New Feature

PT-3711 - Administrators can browse and filter audited events


PT-3709 - Update add-to-family API to also modify pedigree JSON
PT-3723 - Move the xdocuments related to consents into the consents module
PT-3498 - Modify "Update consents" button label to read "Update"
PT-3581 - Prevent opening same patient/family in multiple tabs from pedigree editor and patient form
PT-3671 - User and group search rest service should be case insensitive
PT-3672 - Users and groups suggest service should return results where the input matches the human readable names
PT-3683 - Modify colour of "Affected" status to a darker shade
PT-3717 - Show internal/external family ID under Family history according to configuration for ID in the Admin module
PT-3724 - Remove two extra spaces in front of form title
PT-3728 - Pedigree editor should "show external ID instead of internal" as per setting in the Admin module
PT-3741 - Display group title in the suggest group element
PT-3742 - Add uniqueness ID check configuration to Administration
PT-3753 - Display family members by default on Patient and Family forms
PT-3754 - Display Suggested Genes section by default

Bug fixes

PT-2091 - Admin module: User profile's setting label and icon are overlapped
PT-2134 - When creating a new patient within pedigree editor, the system does not ask if the patient is a part of a study
PT-2850 - In pedigree, unlinked patients may lose data entered in cancers tab
PT-3041 - Out of number of records is misplaced past first page
PT-3523 - Difficult to click on patient link in Pedigree Editor in some cases
PT-3530 - "Delete all" button deletes only one of the abnormalities in pedigree editor
PT-3600 - Autocomplete/suggest inputs in the pedigree node popover retain input between different nodes
PT-3674 - When removing genes from a person in pedigree editor, all associated gene variants need to be removed too
PT-3680 - Patient info lost after pedigree JSON import
PT-3700 - Broken homepage displayed after upgrading from older versions
PT-3701 - Clicking on the creation date from records on the homepage leads to a Not Found page
PT-3703 - The "required" flag is ignored when a patient record is populated from the pedigree
PT-3704 - The id uniqueness is not checked when a patient record is populated from the pedigree editor
PT-3705 - On "quit-and-save" pedigree complains that a family has no members if all members are unlinked
PT-3706 - Measurements don't work for non-admin users
PT-3707 - In pedigree n-person symbols should not be highlighted as a valid drag target for linking patient records
PT-3708 - Automatic layout may leave pedigree in an un-saveable and un-exportable state
PT-3710 - Pedigree import should not import patient records which are not already in the family, but keep those who are
PT-3716 - Import/export functionality in pedigree does not handle group of people
PT-3718 - Pedigree editor should warn user about unsaved changes before closing
PT-3726 - Eliminate possibility of unintended patient record link clicks in pedigree editor
PT-3727 - Undo/redo functionality in pedigree editor may misbehave when un-linked patients are involved
PT-3729 - Unable to remove pedigree node linked to the current patient in pedigree editor
PT-3731 - Non-admin users see uninterpreted code instead of the default workgroup image
PT-3736 - "Create new patient" button doesn't work after being prompted to save changes
PT-3738 - $services.groups.getGroupsForUser returns just a few of the user's workgroups
PT-3743 - If Date Of Birth is marked as required, only year of birth will be enforced
PT-3746 - Passing a group to EntityAccessManager.isAdministrator triggers an XWiki permissions cache bug
PT-3748 - Unable to transfer ownership to another user or group in a certain situation
PT-3749 - Saving and loading pedigree may fail if current user has no view rights for some of the patients in the family
PT-3752 - Pedigree editor does not prompt for save if patient is added to an existing family and left unliked
PT-3761 - Unable to save pedigree nor export it into PhenoTips JSON format
PT-3762 - Patients added to a family with no pedigree outside of pedigree editor do not show up when pedigree is created

See the full list of changes in JIRA.