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News

Dec 25 2018

PhenoTips 1.4.3 (stable) Released

The PhenoTips development team is happy to announce the availability of the PhenoTips 1.4.3 release. In this is release, the following issues have been addressed:

  • PT-3853 - Obfuscate pedigree tumbnail if “Warn about sensitive information when opening this family’s pedigree” is checked
  • PT-3919 - The obfuscation of pedigrees leaves most of the data visible inside pedigree editor
  • PT-3908 - Permissions dialog does not clean up cached data on dialog Cancel button clicked
  • PT-3912 - HPO translations aren't available by default
  • PT-3913 - When re-indexing a vocabulary, all available translations should be included regardless of the localization settings
  • PT-3914 - Inconsistency between the list of cases shown on a group page and list displayed when filtering by that group as owner
  • PT-3907 - Empty collaborator name displayed for XWikiGroups collaborators
  • PT-3921 - PhenoTips doesn't work with Java 11
  • PT-3923 - Cannot import patients from JSON on the All Patients page when PhenoTips is not deployed as the root webapp

See the full list of changes in JIRA

Dec 13 2018

PhenoTips 1.4.2 (stable) Released

The PhenoTips development team is happy to announce the availability of the PhenoTips 1.4.2 release. In this is release, the following issues have been addressed:

Defects

  • PT-3882 - ContactInfo does not parse a string with multiple emails
  • PT-3884 - In the audit logs table the dates are displayed wrongly
  • PT-3892 - Work groups with quotation marks, & or < in their name in their name break the suggest functionality
  • PT-3894 - XML attributes and content are not properly escaped
  • PT-3899 - $family.getId() ($family.getExternalId()) is sometimes displayed instead of the family identifier in the Patient directory
  • PT-3901 - Study descriptions may break the layout of the study page if the DESCRIPTION text does not end in a newline
  • PT-3902 - The reset password page has a typo in the label for re-entering the new password
  • PT-3903 - When a new variant is added in the Genes/Variants table, the variant table title does not display the gene name
  • PT-3906 - Wrong PhenoTips version reported in pedigrees

Improvement

  • PT-3905 - Better button text for study selection dialog when creating a new record

See the full list of changes in JIRA

Nov 30 2018

PhenoTips 1.3.9 (stable) Released

The PhenoTips development team is happy to announce the availability of the PhenoTips 1.3.9 release.
In this is release, the following defects have been addressed:

  • PT-3826 - Switching languages while editing patient record causes strange behaviour
  • PT-3848 - Reindexing ORDO with the default source URL always ends up with a very old version of ORDO
  • PT-3872 - Sometimes livetable's "Loading" animation disapears before the data is actualy loaded
  • PT-3877 - Wrong phenotips version reported in jsons exported from PhenomeCentral
  • PT-3882 - ContactInfo does not parse a string with multiple emails
  • PT-3837 - Clarify the meaning of the "CNP" variant classification in the Copy Number Variants section
  • PT-3876 - Improve data table performance by not using substring match for visibility filters

See the full list of changes in JIRA